Publications and Conferences


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Refereed Publications

Triplet, T. & Butler, G. (2013) A review of genomic data warehousing systems. Briefings in Bioinformatics, doi:10.1093/bib/bbt031.
[full text] [more] IF: 7.75
Triplet, T. & Butler, G. (2013) BenchDW: a generic framework for biological data warehouse benchmarking. In Proc. 28th ACM Symposium On Applied Computing, Bioinformatics track, Coimbra, Portugal, ACM
[full text] Acceptance rate: 24%
Triplet, T. & Butler, G. (2012) The EnzymeTracker: an open-source laboratory information management system for sample tracking. BMC bioinformatics, 13(15)
[full text] [pubmed] [more] [highly accessed] IF: 3.49
Triplet, T., Powlowski, J., Tsang, A. & Butler, B. (2011) EnzymeTracker: A Web-based System for Sample Tracking with Customizable Reports. In Proc. 3rd International Conference on Bioinformatics, Biocomputational Systems and Biotechnologies, Venice, Italy, pp 84-90, IARIA
[full text] [invited for additional publication] Acceptance rate: 26%
Revesz, P. & Triplet, T. (2011) Temporal Data Classification Using Linear Classifiers. Information Systems, 36(1):30-41
[full text] IF: 1.46
Triplet, T. & Butler, G. (2011) Systems Biology Warehousing: Challenges and Strategies toward Effective Data Integration. In Proc. 3rd International Conference on Advances in Databases, Knowledge, and Data Applications, St. Maarten, pp 34-40, IARIA
[full text] Acceptance rate: 29%
Shortridge, M.D., Triplet, T., Revesz, P., Griep, M.A. & Powers, R. (2011) Bacterial protein structures reveal phylum dependent divergence. Computational biology and chemistry, 35(1):24-33
[full text] [pubmed] IF: 1.53
Triplet, T., Shortridge, M., Griep, M., Stark, J., Powers, R. & Revesz, P. (2010) PROFESS: a PROtein Function, Evolution, Structure and Sequence database. Database: The Journal of Biological Databases and Curation, 2010:baq011
[full text] [pubmed] IF: 3.18
Revesz, P. & Triplet, T. (2010) Classification integration and reclassification using constraint databases. Artificial intelligence in medicine, 49(2):79-91
[full text] [pubmed] [more] IF: 1.58
Revesz, P. & Triplet, T. (2009) Temporal Data Classification Using Linear Classifiers. In Proc. 13th East European Conference on Advances of Databases and Information Systems, Riga, Latvia, Lecture Notes in Computer Science, 5739:347-361, Springer
[full text] [invited for additional publication]
Revesz, P. & Triplet, T. (2008) Reclassification of Linearly Classified Data Using Constraint Databases. In Proc. 12th East European Conference on Advances of Databases and Information Systems, Pori, Finland, Lecture Notes in Computer Science, 5207:231-245, Springer
[full text]

Invited Talks

Triplet, T. (2013) TBD. In Proc. 3rd International Conference on Proteomics & Bioinformatics, Philadelphia, USA, declined.

Triplet, T. & Butler, B. (2012) Systems Biology Warehousing: a Benchmark of Frameworks for Effective Data Integration. In Proc. International Conference and Exhibition on Metabolomics & Systems Biology, San Francisco, USA. Journal of Computer Science and Systems Biology, 5(1):109
[more]

Posters and Other Conferences Talks (selection)

Triplet, T. & Butler, B. (2013) A review of genomic data warehousing systems. In Proc. 11th Asia Pacific Bioinformatics Conference, Vancouver, Canada
[poster] [more]
Triplet, T. & Butler, B. (2012) Fungal data warehousing: a benchmark of frameworks for effective data integration. In Proc. Annual General Meeting for Genozymes, Montreal, Canada

Triplet, T., Powlowski, J., Tsang, A. & Butler, B. (2010) The EnzymeTracker, a platform for tracking cloning and expression of fungal enzymes. In Proc. 2nd Annual General Meeting for the Cellulosic Biofuel Network, Ottawa, Canada
[poster] [more]
Triplet, T., Shortridge, M., Griep, M., Stark, J., Powers, R. & Revesz, P. (2009) PROFESS: a PROtein Function, Evolution, Structure and Sequence database. In Proc. 11th International Congress on Amino Acids, Peptides and Proteins, Vienna, Austria. Amino Acids, 37(suppl. 1):95, Springer
[more]
Triplet, T. & Revesz, P. (2008) Reclassification of Linear Classifiers. In Proc. 5th Midwest Database Research Symposium, Chicago, USA
[poster] [more]

Dissertation

Triplet, T. (2009) Classification, Clustering and Data-Mining of Biological Data. University of Nebraska-Lincoln, under the supervision of Dr. Peter Revesz.
[full text] [more]